Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015895635.1_cds_XP_016447726.1_42457
CDS Infomation

[gene=LOC107772764] [db_xref=GeneID:107772764] [protein=chaperone protein DnaJ-like] [protein_id=XP_016447726.1] [location=join(11807..12139,13083..13151,13565..13657,14827..14945,18894..19089,20869..21044,22603..22732,23327..23487,23570..23661,24486..24591,24989..25034)] [gbkey=CDS]
Sequence

ATGAACTCTACGGCAATGGCCAGCACAGCTTCTCTATCTCTCCGCCCTTCTTCTCTCAGC
TTCACTACCTCCGACCGCTCCCATTGTCCCTCCCTTCCTCCTTCTTCCTCTTCTATTTTC
TTCTCCGGTGGGACCCTTTTGTGGACCCACAAGAAGCTTATATCTGTTTCCTTTTCTTCT
TCTTCGTCCTCCCAGTACAGTAAGCAAATTGCGGCACCACGCTTTGGAAGATTGGTGGTG
GTTGCTGCCGCTGATTATTACTCCACTCTTGGGGTCCCAAAATCTGCTAGCAGTAAAGAT
ATTAAGGCTGCTTATCGAAGGTTAGCGCGCCAGTATCACCCGGATGTCAACAAGGAACCT
AATGCACCAGAAAAGTTTAAGGAGATTAAGGATGCTTATGAGGTACTATCAGATGACAAA
AAAAGAGCATTATACGATCAATATGGTGAAGCCGGGGTGAAAAGTACTGTAGGGGCCCAA
GCAGGGGCTTACACGGCAAATCCTTTTGATCTATTTGAGACATTCTTTGGACCTTCTATG
GGTGGTTTTGGAATGGACGGATCTGGATTTGGAACGCGTCGCCGCAGTACTGCTACCAAG
GGTGAAGATCTACGTTACGACATGACATTAGAATTTTCAGCGGCTATCTTTGGAGCAGAA
AAAGAATTCGTGCTTTCACATCTTGAAACTTGTGAAGTTTGTGCGGGAACTGGAGCAAAA
GTAGGCTCCAAAATGAGGATATGTTCAACCTGTGGTGGCCGAGGTCAAGTTATGAGGACT
GAACAAACCCCTTTTGGCATGTTTTCTCAGGTTTCTGTCTGCCCAAACTGTGGTGGGGAT
GGTGAAATGATTTCTGAATCTTGTCGTAAATGCTCTGGCGAGGGGCGGATACGAGTGAAG
AAAGATATAAAAGTCAAGATACCTCCTGGAGTGAGCAAGGGCAGTATCCTCAGAGTTGCT
GGTGAGGGTGATGCAGGTCCTAGGGGGGCCCCACCTGGAGATCTTTTTGTTTATCTTGAC
ATTGAAGAGATACCTGAGATCCAAAGAGATGGCATAAATCTGATTTCAACAGTTTCAGTT
GGTTATCTAGATGCTATACTTGGGGCTGCTGTTAAGGTTAAAACAGTGGAAGGGATGACC
GATCTCCAGATTCCTCCAGGCACTCAACCTGGGGATGTGCTTGTCTTGGCAAGAAAAGGT
GCACCGAAGCTGAATAAGCCATCAATACGTGGGGATCATTTGTTCACGGTTAAAGTTAGC
ATACCAAAACGCATCAGTGTGAAGGAACGTGAATTGCTTGAAGAACTTGCATCCCTAAAT
AAGGCATCAAGCATTCGTACAAAACCTCGACCAACCGTTCAGCCAACTGCTAAAATTACA
GAAACTCCAGTAGATTCAGATTCAAGTACAGCAAAAACCGATGAGTCATCAGAAGATCAA
GATGATCCATTGAAGAAGTTAACAGATTTTGCTGGGTCTGTTGTGAATGGTGCGCTAAAA
TGGTTAAGAGACAACCTGTAA

Peptide Sequence

PEP ID

XP_016447726.1
PEP Infomation

PREDICTED: chaperone protein DnaJ-like [Nicotiana tabacum]
Sequence

MNSTAMASTASLSLRPSSLSFTTSDRSHCPSLPPSSSSIFFSGGTLLWTHKKLISVSFSS
SSSSQYSKQIAAPRFGRLVVVAAADYYSTLGVPKSASSKDIKAAYRRLARQYHPDVNKEP
NAPEKFKEIKDAYEVLSDDKKRALYDQYGEAGVKSTVGAQAGAYTANPFDLFETFFGPSM
GGFGMDGSGFGTRRRSTATKGEDLRYDMTLEFSAAIFGAEKEFVLSHLETCEVCAGTGAK
VGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEMISESCRKCSGEGRIRVK
KDIKVKIPPGVSKGSILRVAGEGDAGPRGAPPGDLFVYLDIEEIPEIQRDGINLISTVSV
GYLDAILGAAVKVKTVEGMTDLQIPPGTQPGDVLVLARKGAPKLNKPSIRGDHLFTVKVS
IPKRISVKERELLEELASLNKASSIRTKPRPTVQPTAKITETPVDSDSSTAKTDESSEDQ
DDPLKKLTDFAGSVVNGALKWLRDNL

Transcript Sequence

Gene sequence data has not been registered.